Composite

Part:BBa_K1415206

Designed by: HO, TSUNG YU   Group: iGEM14_NCTU_Formosa   (2014-10-05)

Pcons+B0034+PBAN(Helicoverpa armigera Hubner)+B0034+BFP+J61048

To predict the PBAN expression in E.coli by computer modeling, we next tested PBAN BFP biobricks. We obtained the average expressive value of the blue fluorescence in the biobrick part (above) and also the control part of Pcons + RBS + BFP + Ter. Therefore, we can use the average value to generate predictions of the PBAN expression in E.coli.


Sequence and Features


Assembly Compatibility:
  • 10
    COMPATIBLE WITH RFC[10]
  • 12
    INCOMPATIBLE WITH RFC[12]
    Illegal NheI site found at 7
    Illegal NheI site found at 30
  • 21
    COMPATIBLE WITH RFC[21]
  • 23
    COMPATIBLE WITH RFC[23]
  • 25
    INCOMPATIBLE WITH RFC[25]
    Illegal NgoMIV site found at 79
    Illegal NgoMIV site found at 909
  • 1000
    COMPATIBLE WITH RFC[1000]



Fig.1-1 Biobrick of Pcons + RBS + PBAN(HAH) + BFP + Term.
Fig.1-2 The growth curve of E.coli containing Pcons + RBS + PBAN(HAH) + RBS + BFP + Ter plasmid (control is the competent cells which can not emit blue light).



Fig.1-3 The blue light fluorescence expression curve of E.coli containing Pcons + RBS + PBAN(HAH) + RBS + BFP + Ter plasmid (control: competent cells that cannot emit blue light).




Fig.1-4 The growth curves of PBAN(HAH)


Fig.1-5Modeling result of Pcons + RBS + PBAN(HAH) + BFP + Ter. The blue line is the expression profile of the theoretical biobrick. And the green line is the expression data of Pcons + RBS + PBAN(HAH) + BFP + Ter. And the red line is the adjusting line from the green and blue one. This line represent the correcting line of theoretical data and real condition data which can make our model not only fit the theoretical condition but also stay away from experimental bias.
[edit]
Categories
Parameters
None